Projects and Mentors
The Center for Tree Science REU program offers a wide range of research experiences in soil and forest ecology, conservation biology, root biology, plant systematics and biodiversity, urban forests and arboriculture, and plant breeding and horticulture.
Undergraduates applying for the 2026 program will select their projects from the list below:
Project List
- Assessing the effects of pruning on branch structure and resiliency
- Conservation and restoration of the threatened, native butternut tree
- Variation in bur oak wood anatomy and relationship to drought adaptation
- Investigating shifts in woody plant flowering time in a botanical garden and herbarium collections
- Characterization of Ash Resistance to Emerald Ash Borer
- Comparative analysis of plant-parasitic and beneficial nematode populations in burned and unburned areas
- Uncovering drivers of soil microbial biodiversity in the city
- The invisible carbon cost: Unlocking the drivers of tree root exudation
Project Descriptions
Assessing the effects of pruning on branch structure and resiliency
Mentors: Jake Miesbauer, Abby Tumino
Summary: Tree pruning is one of the most common arboricultural practices. When done properly, structural pruning can help improve tree resilience to external forces such as wind, rain, and snow. With predicted storm frequency and intensity on the rise, it is important for us to improve our understanding of how to enhance trees’ resilience to storm-related environmental stressors, thereby improving their longevity. In this project, the student will investigate how different pruning methods and intensities affect tree structural properties and, by extension, their resilience to being damaged during storm events. Students will perform different levels of pruning on tree branches and assess the effects on resulting leaf volume and shifts in center of mass. Findings from this project will help to inform practitioners on better tree management strategies.
Project setting: The Morton Arboretum, lab and field components; field component may include adverse conditions with hot and humid weather and biting insects.
Student profile: Interest in urban forestry and arboriculture. Some coursework related to forestry and experience with statistical programming is helpful but not required.
Conservation and restoration of the threatened, native butternut tree
Mentors: Sean Hoban, Emma Leavens
Summary: This REU experience will help to identify the knowledge and tools to help threatened species recover and thrive, focusing on adaptive capacity and resilience of populations. In summer 2026, the REU will work with a team to combine knowledge of genetic diversity and ecology to inform action specifically on butternut (Juglans cinerea), a threatened tree species of eastern North America. The student will participate in fieldwork and analyses to re-assess the health of trees previously assessed in 2025 to determine where trees have grown, declined, or died, over the course of a year. Analyses will investigate if these changes correlate with microsite variation. Findings will be interpreted in light of management and planting of this tree to promote resilient populations.
Project setting: The Morton Arboretum and surrounding area; field and computer components; potential out-of-state fieldwork; field component may include adverse conditions with rugged terrain, hot and humid weather and biting insects.
Student profile: Interest in ecology, adaptation, and/or species conservation. Applicants must have an enthusiasm for fieldwork and in performing analyses in R (with training).
Variation in bur oak wood anatomy and relationship to drought adaptation
Mentors: Christy Rollinson, Brendon Reidy, Rebekah Mohn
Summary: Xylem vessels, which are found in wood, transport water from roots to leaves, and their characteristics influence water use, drought resistance, and flood tolerance in trees. Local adaptation to water availability or an ability to vary new wood characteristics in response to seasonal climatic variation may cause xylem diameter and density to differ among populations or within individuals. In this project, the student will investigate wood anatomy in Bur Oak (Quercus macrocarpa) saplings grown in a common garden from three geographically separate source populations. Using image analysis, the student will quantify xylem vessel density and size in annual growth rings from about 600 stem cross-sections (“cookies”) to test for population-level differences and year-to-year variation. These data will support broader research on drought resistance and resilience in temperate trees.
Project setting: The Morton Arboretum, primarily lab/computer-based with some optional field work; use of power tools will be required.
Student profile: Interest in global change biology, plant physiology, and/or adaptation. Applicants must be comfortable using power tools (primarily power sanders) after training. Project may require extended use of microscopes.
Investigating shifts in woody plant flowering time in a botanical garden and herbarium collections
Mentors: Andrew Hipp, Lindsey Worcester, Christy Rollinso
Summary: Herbarium specimens give us a view into the past, enabling us to model how plant populations have changed over time. Living collections provide quasi-common gardens where plants from a variety of environments can be studied under essentially identical climatic conditions and a narrow range of other abiotic conditions. The REU participant will take advantage of the Arboretum Herbarium’s long-term collections from the living collections and the Chicago region to look at flowering time changes over the past decades to century using a combination of direct observational records of the Arboretum’s living collections and herbarium specimens from those same collections, asking how living collections’ flowering times have changed.
Project setting: The Morton Arboretum; primarily computer-based with some field and herbarium work.
Student profile: Interest in analyzing biodiversity, phenology, or time series data. Applicants will need to have a familiarity with data manipulation in Excel or other data management software, experience or interest in learning data coding skills.
Characterization of Ash Resistance to Emerald Ash Borer
Mentors: Nathan Maren, Chad Rigsby
Summary: Lingering ash (Fraxinus spp.) are mature ash trees that have survived at least two years following the death of 95% or more of ash trees in a stand due to emerald ash borer (EAB) infestation. These trees may possess natural genetic variations that confer resistance to EAB, contributing to their survival. This project will focus on understanding gene expression patterns and molecular responses across various ash taxa with known lingering ash. The student will analyze differential gene expression between resistant and susceptible trees, supported by biochemical analyses to validate key findings and identify lineages useful for breeding EAB-resistant woody landscape plants.
Project setting: The Morton Arboretum; lab components only; some field components optional.
Student profile: Interest in plant genomics and quantitative DNA/RNA techniques, including sequencing and computational methods. Applicants should have taken one course related to molecular biology, genetics, bioinformatics, computer science, plant physiology, evolution, or similar.
Comparative analysis of plant-parasitic and beneficial nematode populations in burned and unburned areas
Mentor: Razieh Razdani
Summary: Fire is a natural ecological process that shapes plant and soil communities, yet its effects on soil organisms are not well understood. Nematodes play vital roles in these systems—some species act as plant pathogens that reduce tree health and growth, while others promote nutrient cycling and support soil health. This project will investigate how fire disturbance affects soil nematode communities by comparing plant-parasitic and beneficial nematode populations in burned versus unburned areas. The student will evaluate nematode abundance, diversity, and functional composition from burned and unburned sites at The Morton Arboretum to evaluate post-fire soil health and ecosystem response to burning. If time allows, samples will also undergo molecular identification to confirm species-level diversity. The student will gain hands-on experience in field sampling, laboratory nematology techniques, molecular analysis, and data interpretation.
Project setting: The Morton Arboretum, field and laboratory components.
Student profile: Interest in plant pathology and/or soil microbiology, fieldwork, and soil sampling. Applicants should have practical experience with a compound microscope, including the ability to conduct sustained microscopic work for extended periods.
Uncovering drivers of soil microbial biodiversity in the city
Mentor: Nicholas Medina, Luke McCormack
Summary: Urbanization is a key global change shaping ecosystems globally, and it also mediates how most of the human population regularly interacts with nature. However, urbanization has also concentrated social inequities including urban heat island effects and additional health concerns for humans. Urban trees are supported by their soils, but it remains unclear how urban tree inequity has shaped urban soils and the microbial communities in those soils. This project will address how tree inequity relates to measured urban soil properties and their microbial biodiversity, to better understand lasting ways of improving urban soils, canopy. The student will participate in soil sampling in and around focal parks of Chicago and conduct lab work at the arboretum analyzing soil biological properties focused on microbial growth and biodiversity analyses.
Project setting: The Morton Arboretum, molecular lab and field components, street and park soil sampling around the Chicago region, mainly city of Chicago across diverse neighborhoods.
Student profile: Interest in soil biology and/or microbiology, and both field and lab work. Students must have completed an introductory biology course with a lab component and one ecology, agriculture, forestry, or environmental studies course.
The invisible carbon cost: Unlocking the drivers of tree root exudation
Mentor: Meghan Midgley, Sav Henderson
Summary: Trees allocate a substantial amount of their photosynthetically fixed carbon belowground as root exudates: carbon that plant roots release into the surrounding soil. Despite their clear contribution to the global carbon cycle, the total quantity of exudates produced by trees and the specific environmental factors controlling their release rates are poorly quantified. In this project, the REU participant will evaluate and optimize methods for collecting tree root exudates. This work aims to establish a more accurate, foundational understanding of carbon flows from trees to soil. The student will gain experience in experimental design, root sampling techniques, chemical analyses, and data analysis.
Project setting: The Morton Arboretum; field, greenhouse, and lab components.
Student profile: Interest in soil and roots and enjoys puzzles. Some coursework related to ecology is beneficial; must enjoy problem solving and tinkering.